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zeiss_lsm_880 [2025/07/28 16:34]
bioimaging [Booking Rules]
zeiss_lsm_880 [2025/12/12 14:56] (current)
bioimaging [Filtersets (for eyepieces)]
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 {{:​warning.png?​25|}} Data files older than **1 month** will be automatically deleted on this system, please copy your data to the GIMM server using the desktop link. {{:​warning.png?​25|}} Data files older than **1 month** will be automatically deleted on this system, please copy your data to the GIMM server using the desktop link.
  
-===== Booking Rules ===== +
-  - **Users** can book at maximum **8 hours per week** +
-  - This usage restriction does not apply for **weekends** and for working days **before 9:00** and **after 18:00** +
-  - Exceptions to these rules require **approval from [[joserino@medicina.ulisboa.pt|José Rino]]**.+
  
 ===== System components ===== ===== System components =====
  
 ==== LASERs ==== ==== LASERs ====
 +
 ^  Laser Unit  ^  Wavelength ​ ^  Maximum Power  ^ ^  Laser Unit  ^  Wavelength ​ ^  Maximum Power  ^
-|  ​Diode 405-30 ​ ​| ​ 405 nm  |  30 mW  | +|  ​Violet ​ ​|  ​<fc #a600ff>405 nm</​fc> ​ ​| ​ 30 mW  | 
-|  Argon  |  458, 488 and 514 nm  |  25 mW  | +|  Argon  |  ​<fc #0071ff>458</fc><fc #00f7ff>488</​fc> ​and <fc #1aff00>514</​fc> ​nm  |  25 mW  | 
-|  ​DPSS 561-20  ​| ​ 561 nm  |  20 mW  | +|  ​Yellow-Green  ​| ​  <fc #c6ff00>561 nm</​fc> ​ ​| ​ 20 mW  | 
-|  ​HeNe594 ​ ​| ​ 594 nm  |  2 mW  | +|  ​Orange ​ ​|  ​<fc #ffd200>594 nm</​fc> ​ ​| ​ 2 mW  | 
-|  ​HeNe633 ​ ​|  ​633 nm  |  5 mW  |+|  ​Red  ​|  ​<fc #​ff4200>​639 ​nm</​fc> ​ ​| ​ 5 mW  | 
 + 
 +==== Filtersets (for eyepieces) ==== 
 + 
 +^  Position ​ ^  Filterset ​ ^  Excitation ​ ^  Dichroic ​ ^  Emission ​ ^  Reference ​ ^ 
 +|  2  |  Cyan  |  426-446 nm  |  455 nm  |  <fc #​00d5ff>​460-500 nm</​fc> ​ |  [[https://​www.chroma.com/​products/​sets/​49001-et-ecfp|49001]] ​ | 
 +|  3  |  Green  |  450-490 nm  |  493 nm  |  <fc #​4aff00>​500-550 nm</​fc> ​ |  [[https://​www.micro-shop.zeiss.com/?​s=7139069fdc79c&​l=en&​p=us&​f=f&​a=v&​b=f&​id=489038-9901-000&​o=|FS38HE]] ​ | 
 +|  4  |  Orange-Red ​ |  533-558 nm  |  570 nm  |  <fc #​ffad00>​570-640 nm</​fc> ​ |  [[https://​www.micro-shop.zeiss.com/?​s=163176628fcf844&​l=en&​p=us&​f=f&​a=v&​b=f&​id=000000-1114-101&​o=|FS43]] ​ | 
 +|  5  |  Blue  |  G 365 nm  |  395 nm  |  <fc #​0028ff>​420-470 nm</​fc> ​ |  [[https://​www.micro-shop.zeiss.com/?​s=163176628fcf844&​l=en&​p=us&​f=f&​a=v&​b=f&​id=488049-9901-000&​o=|FS49]] ​ | 
  
 ==== Objectives ==== ==== Objectives ====
 +
 ^  Magnification ​  ​^ ​ Model  ^  Immersion ​ ^  NA  ^  WD (mm)  ^  Reference ​ ^ ^  Magnification ​  ​^ ​ Model  ^  Immersion ​ ^  NA  ^  WD (mm)  ^  Reference ​ ^
-|  10x  |  EC Plan-Neofluar ​ |  Air  |  0.30  |  5.20  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420340-9901-000/​Objective-EC-Plan-Neofluar-10x-0.30-M27|420340-9901-000]] ​ | +|  ​<fc #fef042>10x</​fc> ​ ​| ​ EC Plan-Neofluar ​ |  Air  |  0.30  |  5.20  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420340-9901-000/​Objective-EC-Plan-Neofluar-10x-0.30-M27|420340-9901-000]] ​ | 
-|  20x  |  Plan-Apochromat ​ |  Air  |  0.80  |  0.55  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420650-9901-000/​Objective-Plan-Apochromat-20x-0.8-M27|420650-9901-000]] ​ | +|  ​<fc #0aa05c>20x</​fc> ​ ​| ​ Plan-Apochromat ​ |  Air  |  0.80  |  0.55  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420650-9901-000/​Objective-Plan-Apochromat-20x-0.8-M27|420650-9901-000]] ​ | 
-|  40x  |  C-Apochromat Corr  |  Water  |  1.20  |  0.28  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​421767-9970-000/​Objective-C-Apochromat-40x-1.20-W-Corr-M27|421767-9970-000]] ​ | +|  ​<fc #01b3f5>40x</​fc> ​ ​| ​ C-Apochromat Corr  |  Water  |  1.20  |  0.28  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​421767-9970-000/​Objective-C-Apochromat-40x-1.20-W-Corr-M27|421767-9970-000]] ​ | 
-|  40x  |  LD C-Apochromat Corr  |  Water  |  1.10  |  0.62  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​421867-9970-000/​Objective-LD-C-Apochromat-40x-1.1-W-Corr-M27|421867-9970-000]] ​ | +|  ​<fc #01b3f5>40x</​fc> ​ ​| ​ LD C-Apochromat Corr  |  Water  |  1.10  |  0.62  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​421867-9970-000/​Objective-LD-C-Apochromat-40x-1.1-W-Corr-M27|421867-9970-000]] ​ | 
-|  63x  |  Plan-Apochromat DIC  |  Oil  |  1.40  |  0.19  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420782-9900-799/​Objective-Plan-Apochromat-63x-1.4-Oil-DIC-M27|420782-9900-799]] ​ |+|  ​<fc #2c80c0>63x</​fc> ​ ​| ​ Plan-Apochromat DIC  |  Oil  |  1.40  |  0.19  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420782-9900-799/​Objective-Plan-Apochromat-63x-1.4-Oil-DIC-M27|420782-9900-799]] ​ |
  
  
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 ^  Magnification ​  ​^ ​ Model  ^  Immersion ​ ^  NA  ^  WD (mm)  ^  Reference ​ ^ ^  Magnification ​  ​^ ​ Model  ^  Immersion ​ ^  NA  ^  WD (mm)  ^  Reference ​ ^
-|  25x  |  LCI Plan-Neofluar Corr DIC  |  Oil/​Glyc/​W ​ |  0.80  |  0.21  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420852-9973-000/​Objective-LCI-Plan-Neofluar-25x-0.8-Imm-Corr-DIC-M27|420852-9972-000]] ​ | +|  ​<fc #0aa05c>25x</​fc> ​ ​| ​ LCI Plan-Neofluar Corr DIC  |  Oil/​Glyc/​W ​ |  0.80  |  0.21  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420852-9973-000/​Objective-LCI-Plan-Neofluar-25x-0.8-Imm-Corr-DIC-M27|420852-9972-000]] ​ | 
-|  40x  |  Plan-Apochromat Corr  |  Dry  |  0.95  |  0.25  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420660-9970-000/​Objective-Plan-Apochromat-40x-0.95-Corr-M27|420660-9970-000]] ​ | +|  ​<fc #01b3f5>40x</​fc> ​ ​| ​ Plan-Apochromat Corr  |  Dry  |  0.95  |  0.25  |  [[https://​www.micro-shop.zeiss.com/​en/​de/​shop/​objectives/​420660-9970-000/​Objective-Plan-Apochromat-40x-0.95-Corr-M27|420660-9970-000]] ​ |
-==== Filtersets (Ocular) ==== +
- +
-^  Position ​ ^  Filterset ​ ^  Reference ​ ^  Excitation ​ ^  Dichroic ​ ^  Emission ​ ^ +
-|  2  |  Cyan  |  [[https://​www.chroma.com/​products/​sets/​49001-et-ecfp|49001]] ​ |  426-446 nm  |  455 nm  |  460-500 nm  | +
-|  3  |  Green  |  [[https://​www.micro-shop.zeiss.com/?​s=7139069fdc79c&​l=en&​p=us&​f=f&​a=v&​b=f&​id=489038-9901-000&​o=|FS38HE]] ​ |  450-490 nm  |  495 nm  |  500-550 nm  | +
-|  4  |  Red  |  [[https://​www.micro-shop.zeiss.com/?​s=163176628fcf844&​l=en&​p=us&​f=f&​a=v&​b=f&​id=000000-1114-101&​o=|FS43]] ​ |  533-558 nm  |  570 nm  |  570-640 nm  | +
-|  5  |  Blue  |  [[https://​www.micro-shop.zeiss.com/?​s=163176628fcf844&​l=en&​p=us&​f=f&​a=v&​b=f&​id=488049-9901-000&​o=|FS49]] ​ |  G 365 nm  |  395 nm  |  420-470 nm  |+
  
 ===== How to start your session ===== ===== How to start your session =====
  
-The system should be always on, you only need to+If you are the **first user** of the day
-  * Turn on the HXP lamp +  * Turn off Components 
-  * Turn on the computer ​(if needed)+  * Turn off System/PC 
 +  * Turn off Main Switch 
 +{{zeiss_lsm_880_1.jpg?​100}} 
 +  * Turn on the computer 
 +  * Turn on Main Switch 
 +  * Turn on Systems/​PC 
 +  * Turn on Components 
 +  * Turn on HXP Lamp
   * Log into Windows with your Agendo credentials   * Log into Windows with your Agendo credentials
-  * Start **ZEN**+  * Start **ZEN Black** 
 +Else: 
 +  * Log into Windows with your Agendo credentials 
 +  * Start **ZEN Black**
  
 ===== How to end your session ===== ===== How to end your session =====
  
-If there is another user for this microscope in the __next hour__:+If there is another user: 
 +  * Clean up immersion objectives (gently wipe with optic cleaning paper and EtOH embedded paper)
   * Exit the ZEN software   * Exit the ZEN software
-  * Leave the Ar laser on Standby 
-  * Leave all other used lasers and HXP lamp on 
   * Log off the computer   * Log off the computer
 +If you are the **last user** of the day:
   * Clean up immersion objectives (gently wipe with optic cleaning paper and EtOH embedded paper)   * Clean up immersion objectives (gently wipe with optic cleaning paper and EtOH embedded paper)
-Else: +  ​* Turn off LASERs ​on ZEN
-  ​* Turn off the lasers ​on **ZEN** +
-  * Turn off the HXP lamp +
-  * Clean up immersion objectives (gently wipe with optic cleaning paper and EtOH embedded paper) +
-  * Exit the ZEN software +
-  * Log off the computer +
- +
-===== Microscope Turn On Procedure (after complete shutdown) ===== +
- +
-If the system is completely off, please follow this procedure:​ +
- +
-{{zeiss_lsm_880_1.jpg?​100 ​ }} +
-  * Turn on the ''​MAIN SWITCH''​ +
-  * Turn on the ''​SYSTEMS/​PC''​ switch +
-  * Turn on the ''​COMPONENTS''​ switch +
-  * Turn on the HXP lamp +
-  * Turn on the computer and login into Windows with your Agendo credentials +
-  * Start the **ZEN Black** software +
- +
-===== Microscope Turn Off Procedure (for complete shutdown) ===== +
- +
-Please only shutdown the system if instructed to do so by the Bioimaging Staff. +
- +
-  * Turn off the lasers on **ZEN**+
   * Exit the ZEN software   * Exit the ZEN software
-  ​* Shutdown the computer +  * Turn off HXP lamp 
-  ​* Turn off the HXP lamp +  * Turn off the computer
-  * Turn off the two switches ''​SYSTEMS/​PC''​ and ''​COMPONENTS''​ +
-  * **Wait 5 min. for Ar laser to cool down** +
-  * Turn off the ''​MAIN SWITCH''​ (**do not turn the key**)+
  
 ---- ----
 [[resources|Back to the Equipment page]] [[resources|Back to the Equipment page]]
zeiss_lsm_880.1753713272.txt.gz · Last modified: 2025/07/28 16:34 by bioimaging