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zeiss_celldiscoverer_7 [2024/07/22 01:49]
bioimaging
zeiss_celldiscoverer_7 [2025/01/14 16:37] (current)
bioimaging [Microscope overview]
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-<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cell_discoverer_7_name.png">​+<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=lisbon_zeiss_cd7_with_lsm_900_name_gimm_2024.png">​
 <table style="​border:​0px solid white;">​ <table style="​border:​0px solid white;">​
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 <a href="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cd7_wiki_2024.png"><​img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cd7_wiki_2024.png"​ width=300></​a>​ <a href="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cd7_wiki_2024.png"><​img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cd7_wiki_2024.png"​ width=300></​a>​
 <td style="​border:​0px solid white;">​ <p style="​line-height:​1.8">​ <td style="​border:​0px solid white;">​ <p style="​line-height:​1.8">​
-<​b>​Location</​b>:​ <a href="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cd7_map_2024.png">​Room P0-A-30</​a>​ (<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=phone_neg.png"​ width=15>​ 47219) <​br> ​+<​b>​Location</​b>:​ <a href="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_cd7_map_2024.png">​[Lisbon] ​Room P0-A-30</​a>​ (<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=phone_neg.png"​ width=15>​ 47219) <​br> ​
 <​b>​Manufacturer</​b>:​ <a href="​http://​www.zeiss.de/​micro"​ target="​_blank">​ZEISS Microscopy</​a><​br>​ <​b>​Manufacturer</​b>:​ <a href="​http://​www.zeiss.de/​micro"​ target="​_blank">​ZEISS Microscopy</​a><​br>​
 <​b>​Model</​b>:​ <a href="​https://​www.zeiss.com/​microscopy/​en/​products/​imaging-systems/​celldiscoverer-7.html">​Celldiscoverer 7 with LSM 900</​a><​br>​ <​b>​Model</​b>:​ <a href="​https://​www.zeiss.com/​microscopy/​en/​products/​imaging-systems/​celldiscoverer-7.html">​Celldiscoverer 7 with LSM 900</​a><​br>​
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   * [[https://​www.zeiss.com/​microscopy/​en/​resources/​insights-hub/​life-sciences/​the-smart-microscope-for-automated-workflows-celldiscoverer-7-with-lsm-900.html|ZEISS Webinar: LSM 980 Airyscan 2 Multiplex mode]]   * [[https://​www.zeiss.com/​microscopy/​en/​resources/​insights-hub/​life-sciences/​the-smart-microscope-for-automated-workflows-celldiscoverer-7-with-lsm-900.html|ZEISS Webinar: LSM 980 Airyscan 2 Multiplex mode]]
  
-{{:​warning.png?​25|}} Data files older than **1 month** will be automatically deleted on this system, please copy your data to the iMM server using the desktop link.+{{:​warning.png?​25|}} Data files older than **1 month** will be automatically deleted on this system, please copy your data to the GIMM server using the desktop link
 + 
 +===== Booking Rules ===== 
 +  - **Users** can book at maximum **8 hours per week** 
 +  - This usage restriction does not apply for **weekends** and for working days **before 9:00** and **after 21:00** 
 +  - Exceptions to these rules require **approval from [[joserino@medicina.ulisboa.pt|José Rino]]**.
  
 ===== System components ===== ===== System components =====
  
-==== LEDs  ====+==== LASERs (confocal) ==== 
 + Laser Unit  ^  Wavelength ​ ^  Maximum Power  ^ 
 +|  405  |  405 nm  |  5 mW  | 
 +|  488  |  488 nm  |  10 mW  | 
 +|  561  |  561 nm  |  10 mW  | 
 +|  640  |  640 nm  |  5 mW  | 
 + 
 +==== LEDs (widefield) ​====
 ^  Line  ^  Wavelength ​ ^ ^  Line  ^  Wavelength ​ ^
 |  UV  |  385 nm  | |  UV  |  385 nm  |
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 |  R  |  625 nm  | |  R  |  625 nm  |
  
-==== Filtersets ====+==== Filtersets ​(widefield) ​====
  
 ^  Position ​ ^  Filterset ​ ^  Reference ​ ^  Dichroic ​ ^  Emission ​ ^ ^  Position ​ ^  Filterset ​ ^  Reference ​ ^  Dichroic ​ ^  Emission ​ ^
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 |  :::  |  :::  |  :::  |  :::  |  1x  |  50x  | |  :::  |  :::  |  :::  |  :::  |  1x  |  50x  |
 |  :::  |  :::  |  :::  |  :::  |  2x  |  100x  | |  :::  |  :::  |  :::  |  :::  |  2x  |  100x  |
-==== Cameras ​====+ 
 +==== Camera (widefield) ​====
 ^  Model  ^  Type  ^  Frame Size  ^  Pixel Size (µm)  ^ ^  Model  ^  Type  ^  Frame Size  ^  Pixel Size (µm)  ^
-|  Axiocam 702 mono  |  CMOS  |  1920 x 1216  |  5.86 x 5.86  | 
 |  [[https://​www.zeiss.com/​microscopy/​en/​products/​cameras/​axiocam-712-mono.html|Axiocam 712 mono CMOS]] ​ |  CMOS  |  4096 x 3008  |  3.45 x 3.45  | |  [[https://​www.zeiss.com/​microscopy/​en/​products/​cameras/​axiocam-712-mono.html|Axiocam 712 mono CMOS]] ​ |  CMOS  |  4096 x 3008  |  3.45 x 3.45  |
 +
 +===== How to start your session =====
 +
 +The system should be always on, you only need to:
 +  * Activate the CD7 by pressing the "​Standby"​ button (to the left of the touch panel)
 +{{::​cd7_standby.png?​250|}}
 +  * Turn on the computer
 +  * Log into Windows with your Agendo credentials
 +  * Start **ZEN**
 +  * Open the **Main valve** of the CO2 tank (if needed) - do not change the pressure settings!
 +{{::​cd7_co2.png?​130|}}
 +
 +===== How to end your session =====
 +
 +If there is another user for this microscope in the __next hour__:
 +  * Exit the ZEN software, leave the lasers on (if used)
 +  * Log off the computer
 +Else:
 +  * Close the main valve of the CO2 tank (if used)
 +  * Turn off the lasers on **ZEN**
 +  * Exit the ZEN software
 +  * Shutdown the computer
 +  * Press the "​Standby"​ button (to the left of the touch panel).
 +
 +===== Microscope Turn On Procedure (after complete shutdown) =====
 +
 +If the system is completely off, please follow this procedure:
 +
 +  * Turn on the ''​MAIN SWITCH''​ (bottom right of the CD7)
 +{{::​cd7_main_switch.png?​250|}}
 +  * Activate the CD7 by pressing the "​Standby"​ button (to the left of the touch panel)
 +  * Turn on the computer
 +  * Log into Windows with your Agendo credentials
 +  * Start the **ZEN** software
 +  * Open the **Main valve** of the CO2 tank (if needed) - do not change the pressure settings!
 +
 +===== Microscope Turn Off Procedure (for complete shutdown) =====
 +
 +Please only shutdown the system if instructed to do so by the Bioimaging Unit.
 +
 +  * Close the main valve of the CO2 tank (if used)
 +  * Turn off the lasers on **ZEN**
 +  * Exit the ZEN software
 +  * Shutdown the computer
 +  * Press the "​Standby"​ button (to the left of the touch panel)
 +  * Turn off the ''​MAIN SWITCH''​ (bottom right of the CD7)
  
 ---- ----
 [[resources|Back to the Equipment page]] [[resources|Back to the Equipment page]]
zeiss_celldiscoverer_7.1721605781.txt.gz · Last modified: 2024/07/22 01:49 by bioimaging