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oeiras_zeiss_lightsheet_z1 [2024/12/09 14:54]
bioimaging
oeiras_zeiss_lightsheet_z1 [2025/03/14 11:01] (current)
bioimaging
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 <​html>​ <​html>​
-<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_lightsheet_z1_name_new.png">​+<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=oeiras_zeiss_lightsheet_z.1_name_gimm_2024.png">​
 <table style="​border:​0px solid white;">​ <table style="​border:​0px solid white;">​
 <tr style="​border:​0px solid white;">​ <tr style="​border:​0px solid white;">​
 <td style="​border:​0px solid white;">​ <td style="​border:​0px solid white;">​
-<a href="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_lightsheet_z1_wiki_2024.png"><​img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=zeiss_lightsheet_z1_wiki_2024.png" width=300></​a>​+<a href="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=lightsheet.jpg"><​img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=lightsheet.jpg" width=300></​a>​
 <td style="​border:​0px solid white;">​ <p style="​line-height:​1.8">​ <td style="​border:​0px solid white;">​ <p style="​line-height:​1.8">​
-<​b>​Location</​b>: ​<​a> ​Room 0B03 </a> (<img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=phone_neg.png"​ width=15>​ 4533) <​br> ​+<​b>​Location</​b>: ​[Oeiras] ​Room 0B03<​br> ​
 <​b>​Manufacturer</​b>:​ <a href="​http://​www.zeiss.de/​micro"​ target="​_blank">​ZEISS Microscopy</​a><​br>​ <​b>​Manufacturer</​b>:​ <a href="​http://​www.zeiss.de/​micro"​ target="​_blank">​ZEISS Microscopy</​a><​br>​
 <​b>​Model</​b>:​ <a href="​https://​www.youtube.com/​watch?​v=vKHQudCKVGc"​ target="​_blank">​Lightsheet Z.1</​a>​ (click for Zeiss webinar)<​br>​ <​b>​Model</​b>:​ <a href="​https://​www.youtube.com/​watch?​v=vKHQudCKVGc"​ target="​_blank">​Lightsheet Z.1</​a>​ (click for Zeiss webinar)<​br>​
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 &nbsp <br> &nbsp <br>
 &nbsp <br> &nbsp <br>
-&rarr; <a href="/​facility/​bioimaging/​doku.php?​id=zeiss_lightsheet_z1_usage"><​img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=chart_line.png"> ​Zeiss Lightsheet Z.1 Usage Statistics</​a>​+&rarr; <a href="/​facility/​bioimaging/​doku.php?​id=oeiras_lightsheet_z1_usage"><​img src="/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=chart_line.png"> ​ZEISS Lightsheet Z.1 Usage Statistics</​a>​
  </​p>​  </​p>​
 </td> </td>
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   * **Sample Size**: up to 1 x 1 x 2 cm   * **Sample Size**: up to 1 x 1 x 2 cm
  
 +<​html>​
 +<!--
     * [[https://​imm.medicina.ulisboa.pt/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=en_poster_overview-clearing-methods_rel-2.0.pdf|Clearing Methods in Microscopy (poster)]] ​     * [[https://​imm.medicina.ulisboa.pt/​facility/​bioimaging/​lib/​exe/​fetch.php?​media=en_poster_overview-clearing-methods_rel-2.0.pdf|Clearing Methods in Microscopy (poster)]] ​
-    * [[https://​hcbi.fas.harvard.edu/​files/​lightsheetz1_sample-preparation_zeiss.pdf| Sample Preparation for Light Sheet Microscopy (white paper)]] 
     * [[https://​asset-downloads.zeiss.com/​catalogs/​download/​mic/​b91bc689-66ab-4d85-b3f6-c31ebea22ba7/​EN_wp_Lightsheet-Z.1_Expanding-Clearing-Solutions.pdf| Improved Imaging of Cleared Samples (application note)]]     * [[https://​asset-downloads.zeiss.com/​catalogs/​download/​mic/​b91bc689-66ab-4d85-b3f6-c31ebea22ba7/​EN_wp_Lightsheet-Z.1_Expanding-Clearing-Solutions.pdf| Improved Imaging of Cleared Samples (application note)]]
-  * [[https://​www.youtube.com/​watch?​v=Ki1wtoXIkis|Sample Preparation for Whole Organisms, Plants, and 3D Cell & Tissue Cultures (video)]] 
   * [[https://​www.youtube.com/​watch?​v=Ql7T7LrvI_I|ZEISS Microscopy How-to: Mount cleared samples in Lightsheet Z.1 (video)]]   * [[https://​www.youtube.com/​watch?​v=Ql7T7LrvI_I|ZEISS Microscopy How-to: Mount cleared samples in Lightsheet Z.1 (video)]]
   * [[https://​www.youtube.com/​watch?​v=vKHQudCKVGc|ZEISS Webinar: In Vivo and Cleared Tissue Imaging with Light Sheet Fluorescence Microscopy (video)]]   * [[https://​www.youtube.com/​watch?​v=vKHQudCKVGc|ZEISS Webinar: In Vivo and Cleared Tissue Imaging with Light Sheet Fluorescence Microscopy (video)]]
 +-->
 +</​html>​
 +
 +    * [[https://​hcbi.fas.harvard.edu/​files/​lightsheetz1_sample-preparation_zeiss.pdf| Sample Preparation for Light Sheet Microscopy (white paper)]]
 +    * [[https://​www.youtube.com/​watch?​v=Ki1wtoXIkis|Sample Preparation for Whole Organisms, Plants, and 3D Cell & Tissue Cultures (video)]]
 +
  
 ===== Tutorials for Image Analysis with Arivis ===== ===== Tutorials for Image Analysis with Arivis =====
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 ==== LASERs ==== ==== LASERs ====
 ^  Laser Unit  ^  Wavelength ​ ^  Maximum Power  ^ ^  Laser Unit  ^  Wavelength ​ ^  Maximum Power  ^
-|  Solid State 445|  445 nm  |  20 mW  |+|  Solid State 445  |  445 nm  |  20 mW  |
 |  Solid State 488  |  488 nm  |  50 mW  | |  Solid State 488  |  488 nm  |  50 mW  |
-|  Solid State 561 |  561 nm  |  50 mW  |+|  Solid State 561  |  561 nm  |  50 mW  |
 |  Solid State 638  |  638 nm  |  75 mW  | |  Solid State 638  |  638 nm  |  75 mW  |
  
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   * Turn off the system using the control units (PC, System and Incubation).   * Turn off the system using the control units (PC, System and Incubation).
  
-  * Remove the chamber, disassemble it, and rinse all the parts that compose it with distilled water. Leave them to dry in the appropriate box with the lid opened. ​__Warning__: If you have been trained and authorized by the staff to handle objectives, make sure to check and store the 2 illumination objectives, and to place the detection objective in the "​washer"​ before cleaning it. You can ask the facility staff to inspect and clean them to prepare for the next user, if you're not comfortable with this procedure.+  * Remove the chamber, disassemble it, and rinse all the parts that compose it with distilled water. Leave them to dry in the appropriate box with the lid opened. ​__Warning:__ If you have been trained and authorized by the staff to handle objectives, make sure to check and store the 2 illumination objectives, and to place the detection objective in the "​washer"​ before cleaning it. You can ask the facility staff to inspect and clean them to prepare for the next user, if you're not comfortable with this procedure.
  
   * Take your belongings (dishes, gloves, syringe, etc...), and leave the desk ready for the next user.   * Take your belongings (dishes, gloves, syringe, etc...), and leave the desk ready for the next user.
oeiras_zeiss_lightsheet_z1.1733752493.txt.gz ยท Last modified: 2024/12/09 14:54 by bioimaging