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microscopytools [2016/04/17 03:50] bioimaging created |
microscopytools [2016/04/17 03:52] bioimaging [Image viewers from microscopy companies] |
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===== Software written by Bioimaging Facility staff ===== | ===== Software written by Bioimaging Facility staff ===== | ||
- | * {{:icon_ubi.png?30|}} [[software_cclab|**Cell Counter L*a*b* **]] | + | * {{:icon_ubi.png?30|}} **[[software_cclab|Cell Counter L*a*b*]]** |
* Count cells with specific nuclear and cytoplasmic staining in color images (immunohistochemical staining) | * Count cells with specific nuclear and cytoplasmic staining in color images (immunohistochemical staining) | ||
- | * {{:icon_ubi.png?30|}} [[software_mcclsm|**Multichannel Cell Counter LSM**]] | + | * {{:icon_ubi.png?30|}} **[[software_mcclsm|Multichannel Cell Counter LSM]]** |
* Count cells with specific fluorescent labeling combinations - LSM files | * Count cells with specific fluorescent labeling combinations - LSM files | ||
- | * {{:icon_ubi.png?30|}} [[software_mccrgb|**Multichannel Cell Counter RGB**]] | + | * {{:icon_ubi.png?30|}} **[[software_mccrgb|Multichannel Cell Counter RGB]]** |
* Count cells with specific fluorescent labeling combinations - TIF files | * Count cells with specific fluorescent labeling combinations - TIF files | ||
- | * {{:icon_staqtool.png?30|}} [[software_staqtool|**STaQTool - Spot Tracking and Quantification Tool**]] | + | * {{:icon_staqtool.png?30|}} **[[software_staqtool|STaQTool - Spot Tracking and Quantification Tool]]** |
* Track diffraction-limited spots in 2D or 3D time-lapse sequences | * Track diffraction-limited spots in 2D or 3D time-lapse sequences | ||
* Quantify total fluorescence intensity with Gaussian fitting | * Quantify total fluorescence intensity with Gaussian fitting | ||
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* Supports CZI file format | * Supports CZI file format | ||
- | * {{slidebook-icon.png?35|}} **[[https://www.intelligent-imaging.com/reader.php|Slidebook Reader]]** | + | * {{slidebook-icon.png?35|}} **[[https://www.intelligent-imaging.com/reader.php|3i Slidebook Reader]]** |
* Supports SLD file format | * Supports SLD file format | ||
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[[start|Back to the Bioimaging Wiki]] | [[start|Back to the Bioimaging Wiki]] |