Processing Data will be deleted after: 1 month
Storage Data will be deleted after: 3 months  
 
Location: Room P3-A-5
→ Chronos Usage Statistics

===== System overview ===== Chronos is a 64-bit PC running Windows 10, equipped with: * 2x Intel EMR 6534 2P 8C Processors @ 3.9GHz * 256 Gb RAM memory * System disk: 960GB Samsung PM9A3 NVMe PCIe * Data Storage: 7 Tb * Data Processing: 7 Tb (2x Samsung PM893 3.84 TB SATA 6Gb/s as RAID 0) * Nvidia RTX4000 ADA Gen 20GB, CUDA capable (graphic card) * 26" TFT monitor Please [[imm-bioimaging@medicina.ulisboa.pt|contact us]] if you wish to use the workstation remotely. ===== Software ===== * {{::cell_profiler.png?35|}} **[[https://cellprofiler.org/|CellProfiler 4.2.8]]** * Free, open-source software for quantitative analysis of biological images * {{:fiji_icon.png?35|}} **[[https://imagej.net/software/fiji/|FIJI]]** * FIJI is just ImageJ (“batteries-included” distribution of ImageJ2) * {{:imaris_icon.png?35|}} **[[https://imaris.oxinst.com/|Imaris 10.2.0 CF]]** * Visualization, analysis and processing of 3D and 4D microscopy datasets * {{::ndpview_icon.png?35|}} **[[https://www.hamamatsu.com/eu/en/product/life-science-and-medical-systems/digital-slide-scanner/U12388-01.html|NDP.View 2]]** * Supports .NDPI file format * {{nis_icon.png?35|}} **[[https://www.microscope.healthcare.nikon.com/products/software/nis-elements/viewer|NIS-Elements Viewer 5.21]]** * Supports .ND2 file format * {{:qupath_icon.png?40|}} **[[https://qupath.github.io/|QuPath 0.6.0]]** * Open Software for Bioimage Analysis of whole slide images * {{slidebook_2022_icon.png?35|}} **[[https://www.intelligent-imaging.com/slidebook|Slidebook Reader 2025]]** * Supports .SLD file format. * {{zen_icon.png?35|}} **[[https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html|ZEN Blue 3.12 Desk]]** * **Airyscan Processing**, Stitching and MIP of .CZI files {{:warning.png?25|}} Data files older than **3 months** will be automatically deleted on this system, please copy your data to the GIMM server using the desktop link. ---- [[resources|Back to the Equipment page]]