Bioimaging Wiki

This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong.
<html>
<img src="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_z2_lightsheet_workstation_name_gimm_2024.png">
<table style="border:0px solid white;">
<tr style="border:0px solid white;">
<td style="border:0px solid white;">
<a href="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_-_z2_z3_workstations.png"><img src="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_-_z2_z3_workstations.png"></a>
<td style="border:0px solid white;"> <p style="line-height:1.8">
&nbsp <br>
&nbsp <br>
&nbsp <br>
Data will be deleted after: <b>3 months</b>
&nbsp <br>
&nbsp <br>
&nbsp <br>
&nbsp <br><b>Location</b>: Bartolomeu Dias wing <br> 
&rarr; <a href="/facility/bioimaging/doku.php?id=z3_workstation_usage"><img src="/facility/bioimaging/lib/exe/fetch.php?media=chart_line.png">  Z2 Lightsheet Workstation Usage Statistics</a>
 </p>
</td>
</tr>
</table>
</html>

===== System overview =====
Z2 is a 64-bit PC running Windows 10, dedicated to light sheet imaging analysis, equipped with:
  * 2x Intel® Xeon Processor E5.2620 @ 2.4GHz
  * 256 GB DDR4 RAM memory 
  * 2x 256 GB SSD + 36 TB disk space
  * 8 GB NVIDIA Quadro P4000 (graphics card)
  * 30" TFT monitor

===== Software  =====

  * {{:fiji_icon.png?35|}} **[[https://imagej.net/software/fiji/|FIJI]]**
      * FIJI is just ImageJ (“batteries-included” distribution of ImageJ2)

  * {{zen_icon.png?35|}} **[[https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html|Zeiss ZEN Blue 3.11 Desk]]**
      * **Lightsheet Processing**

  * {{zen__black_icon.png?35|}} **[[https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html|Zeiss ZEN Black 2014 SP1]]**
      * **Lightsheet Processing**


  * {{:matlab_icon.png?35|}} **[[https://www.mathworks.com/products/matlab.html?s_tid=hp_products_matlab|MATLAB R2020a]]**
      * Programming and numeric computing platform, with the following toolboxes: Curve Fitting, Image Acquisition and Image Processing, Optimization and Parallel Computing, Partial Differential Equation and Statistics and Machine Learning

  * {{arivis_icon.png?35|}} **[[https://www.zeiss.com.sg/microscopy/l/campaigns/software/2023/arivis-vision4d.html|Arivis 4D Vision v3.1.2]]**
      * A modular software for multi-channel 2D, 3D and 4D images of almost unlimited size, highly scalable and independent of local system resources.


{{:warning.png?25|}} Data files older than **3 months** will be automatically deleted on this system, please copy your data to the file server using the desktop link.

----
[[resources|Back to the Equipment page]]
Bioimaging Wiki

User Tools

Site Tools

Page Tools
