z2_workstation
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z2_workstation [2025/01/06 01:59] bioimaging created |
z2_workstation [2025/01/10 17:14] (current) bioimaging |
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| - | <a href="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_-_z2_workstation.png"><img src="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_-_z2_workstation.png"></a> | + | <a href="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_-_z2_z3_workstations.png"><img src="/facility/bioimaging/lib/exe/fetch.php?media=oeiras_-_z2_z3_workstations.png"></a> |
| <td style="border:0px solid white;"> <p style="line-height:1.8"> | <td style="border:0px solid white;"> <p style="line-height:1.8"> | ||
|   <br> |   <br> | ||
|   <br> |   <br> | ||
|   <br> |   <br> | ||
| + | Data will be deleted after: <b>3 months</b> | ||
|   <br> |   <br> | ||
|   <br> |   <br> | ||
|   <br> |   <br> | ||
| - |   <br><b>Location</b>: <br> | + |   <br><b>Location</b>: Bartolomeu Dias wing <br> |
| - | → <a href="/facility/bioimaging/doku.php?id=z2_workstation_usage"><img src="/facility/bioimaging/lib/exe/fetch.php?media=chart_line.png"> Z2 Lightsheet Workstation Usage Statistics</a> | + | → <a href="/facility/bioimaging/doku.php?id=z3_workstation_usage"><img src="/facility/bioimaging/lib/exe/fetch.php?media=chart_line.png"> Z2 Lightsheet Workstation Usage Statistics</a> |
| </p> | </p> | ||
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| ===== System overview ===== | ===== System overview ===== | ||
| + | Z2 is a 64-bit PC running Windows 10, dedicated to light sheet imaging analysis, equipped with: | ||
| + | * 2x Intel® Xeon Processor E5.2620 @ 2.4GHz | ||
| + | * 256 GB DDR4 RAM memory | ||
| + | * 2x 256 GB SSD + 36 TB disk space | ||
| + | * 8 GB NVIDIA Quadro P4000 (graphics card) | ||
| + | * 30" TFT monitor | ||
| ===== Software ===== | ===== Software ===== | ||
| + | * {{:fiji_icon.png?35|}} **[[https://imagej.net/software/fiji/|FIJI]]** | ||
| + | * FIJI is just ImageJ (“batteries-included” distribution of ImageJ2) | ||
| + | |||
| + | * {{zen_icon.png?35|}} **[[https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html|Zeiss ZEN Blue 3.11 Desk]]** | ||
| + | * **Lightsheet Processing** | ||
| + | |||
| + | * {{zen__black_icon.png?35|}} **[[https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html|Zeiss ZEN Black 2014 SP1]]** | ||
| + | * **Lightsheet Processing** | ||
| + | |||
| + | |||
| + | * {{:matlab_icon.png?35|}} **[[https://www.mathworks.com/products/matlab.html?s_tid=hp_products_matlab|MATLAB R2020a]]** | ||
| + | * Programming and numeric computing platform, with the following toolboxes: Curve Fitting, Image Acquisition and Image Processing, Optimization and Parallel Computing, Partial Differential Equation and Statistics and Machine Learning | ||
| + | |||
| + | * {{arivis_icon.png?35|}} **[[https://www.zeiss.com.sg/microscopy/l/campaigns/software/2023/arivis-vision4d.html|Arivis 4D Vision v3.1.2]]** | ||
| + | * A modular software for multi-channel 2D, 3D and 4D images of almost unlimited size, highly scalable and independent of local system resources. | ||
| + | |||
| + | |||
| + | {{:warning.png?25|}} Data files older than **3 months** will be automatically deleted on this system, please copy your data to the file server using the desktop link. | ||
| ---- | ---- | ||
| [[resources|Back to the Equipment page]] | [[resources|Back to the Equipment page]] | ||
z2_workstation.1736125147.txt.gz · Last modified: 2025/01/06 01:59 by bioimaging
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